Impact of Chromosome 16p13.11 Deletion on Fetal Development and Screening - Rare Disease

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Amniotic fluid chromosome 16p13.11 microdeletion (15048751_16249607) approximately 1.20MB?


Hello, this amniotic fluid chip has confirmed a primary mutation.
I would like to ask if there are any case numbers in Taiwan that can be referenced regarding the impact of this deletion on the fetus? The mention of an expressivity rate of 13.1%—is that considered high? If the condition relies on early intervention and rehabilitation, what percentage of improvement can be expected? Additionally, what newborn screenings are necessary after birth? Thank you.

Yu, 30~39 year old female. Ask Date: 2020/08/08

Dr. Jian Yingxiu reply Rare Disease


The 16p13.11 microdeletion is currently known to potentially cause developmental delays, learning disabilities, or epilepsy; however, there are also reports of asymptomatic cases.
Therefore, it is not a condition with a 100% penetrance.
Additionally, since the range and size of the deletions vary among individuals, even if the deletion patterns are identical, the level of care and support for learning provided by each family can differ.
It is recommended to discuss this with your physician or to bring the report to a genetic counseling clinic at a medical center for further consultation with your partner.

Reply Date: 2020/08/08

More Info


The deletion of chromosome 16p13.11 is a genetic alteration that has been associated with various developmental and health issues in affected individuals. This specific deletion can lead to a range of phenotypic outcomes, including developmental delays, intellectual disabilities, and increased susceptibility to certain psychiatric disorders. The impact of this deletion on fetal development can vary significantly depending on the size of the deletion, the genes involved, and whether the deletion is inherited or de novo (newly occurring).

In terms of prevalence, studies suggest that the 16p13.11 deletion occurs in approximately 1 in 1,000 individuals in the general population, but its clinical significance can vary. The penetrance, or the likelihood that individuals with the deletion will exhibit symptoms, is reported to be around 13.1%. This means that while a significant number of individuals with this deletion may not show any clinical symptoms, there is still a notable risk for developmental issues.

Regarding early intervention, research indicates that early therapeutic interventions, such as physical therapy, occupational therapy, and speech therapy, can significantly improve developmental outcomes for children with genetic deletions. The extent of improvement varies from child to child, but early intervention is generally associated with better long-term outcomes. It is crucial to have a tailored intervention plan based on the child's specific needs and developmental profile.

After birth, newborn screening is essential to identify any potential health issues early on. In Taiwan, the standard newborn screening program typically includes tests for metabolic disorders, congenital hypothyroidism, and hemoglobinopathies. Given the specific deletion on chromosome 16p13.11, it may also be advisable to conduct additional genetic counseling and testing to monitor for any associated conditions that could arise from this deletion.

Parents should consider consulting with a genetic counselor or a specialist in genetics to discuss the implications of the deletion, potential health risks, and the appropriate follow-up care for their child. Genetic counseling can provide valuable insights into the likelihood of recurrence in future pregnancies, the need for further testing, and the available support resources.

In summary, the impact of the 16p13.11 deletion on fetal development can be significant, but the degree of impact varies. Early intervention can improve outcomes, and newborn screening is crucial for identifying any potential health issues. Parents are encouraged to seek genetic counseling for personalized guidance and support.

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